BLASTP 2.8.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: proteins.fasta 18,604 sequences; 6,094,370 total letters Query= sp|P0A6H1|CLPX_ECOLI ATP-dependent Clp protease ATP-binding subunit ClpX OS=Escherichia coli (strain K12) OX=83333 GN=clpX PE=1 SV=2 Length=424 Score E Sequences producing significant alignments: (Bits) Value Q8FN57 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Co... 518 0.0 Q6NFU7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Co... 518 0.0 A0LSV2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ac... 517 0.0 A0JXL2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ar... 516 0.0 Q6AFZ6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Le... 509 0.0 B0RAS4 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cl... 491 1e-173 Q8G5R1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Bi... 432 6e-150 A0K1M3 ATPase AAA-2 domain protein OS=Arthrobacter sp. (strain F... 54.3 4e-08 Q8G871 Protease OS=Bifidobacterium longum (strain NCC 2705) OX=2... 51.2 5e-07 Q8FMH5 Putative endopeptidase Clp ATP-binding chain C OS=Coryneb... 47.0 8e-06 Q6NFB1 ATP-dependent Clp protease ATP-binding subunit OS=Coryneb... 45.8 2e-05 A0LW31 AAA ATPase, central domain protein OS=Acidothermus cellul... 45.4 2e-05 A0LRB8 ATP-dependent zinc metalloprotease FtsH OS=Acidothermus c... 43.5 1e-04 Q8G6B7 Holliday junction ATP-dependent DNA helicase RuvB OS=Bifi... 42.7 1e-04 A0LR74 ATP-dependent zinc metalloprotease FtsH OS=Acidothermus c... 43.1 1e-04 Q6ACQ0 ATP-dependent zinc metalloprotease FtsH OS=Leifsonia xyli... 43.1 1e-04 Q8G3S2 ATP-dependent zinc metalloprotease FtsH OS=Bifidobacteriu... 43.1 1e-04 A0JXB1 Holliday junction ATP-dependent DNA helicase RuvB OS=Arth... 42.4 2e-04 A0JR82 ATP-dependent zinc metalloprotease FtsH OS=Arthrobacter s... 41.6 3e-04 A0K236 AAA ATPase, central domain protein OS=Arthrobacter sp. (s... 41.6 4e-04 B0RHW4 ATP-dependent zinc metalloprotease FtsH OS=Clavibacter mi... 41.2 5e-04 Q6NF92 ATP-dependent zinc metalloprotease FtsH OS=Corynebacteriu... 40.8 7e-04 Q6NGK1 AAA domain-containing protein OS=Corynebacterium diphther... 40.4 8e-04 Q8FMG2 ATP-dependent zinc metalloprotease FtsH OS=Corynebacteriu... 40.4 9e-04 >Q8FN57 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=clpX PE=3 SV=1 Length=426 Score = 518 bits (1334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 259/426 (61%), Positives = 325/426 (76%), Gaps = 11/426 (3%) Query 5 RKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEV-APHRERSA 63 R S LL CSFCGKSQ +V+KLIAG +VYICDEC++LCN+II EE+ + E Sbjct 3 RMQESADLLKCSFCGKSQKQVKKLIAGGAVYICDECIELCNEIIEEELGQAQGQEEEHGE 62 Query 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNG--------VELGKSNI 115 LP P EI LD YV+GQ+QAK++L+VAVYNHYKRLR + G EL KSNI Sbjct 63 LPKPSEISAFLDKYVVGQDQAKRILSVAVYNHYKRLRAHEQIGGRRRRDEEDTELIKSNI 122 Query 116 LLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQK 175 LL+GPTGSGKT LA+TLA+LLDVPF +ADAT+LTEAGYVGEDVENI+ KLLQ D+DV++ Sbjct 123 LLLGPTGSGKTYLAQTLAKLLDVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVER 182 Query 176 AQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEF 235 AQRGI+YIDE+DKISRKS+NPSITRDVSGEGVQQALLK++EGTVAA+PPQGGRKHP Q+F Sbjct 183 AQRGIIYIDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTVAAIPPQGGRKHPNQDF 242 Query 236 LQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDL 295 +Q+DT+ ILFI GAF+GL+K+I R G+GFG V +K D+ E ++ V PEDL Sbjct 243 IQLDTTNILFIVAGAFSGLEKIIGER-RGKKGLGFGVEVASKKDEEKE-DIFKDVRPEDL 300 Query 296 IKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEAL 355 +KFGLIPEFIGRLPVVAT+ L +E+L+++L EP+N+L KQY+ LF ++ L F D+AL Sbjct 301 VKFGLIPEFIGRLPVVATVANLDQESLVKVLTEPRNSLVKQYKRLFEMDDTLLTFTDDAL 360 Query 356 DAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGK 415 +AIA A+ RKTGARGLR+I+E L+ MYD+P +DV +VVI V G+++P LI Sbjct 361 EAIADLALERKTGARGLRAILEEILVPIMYDIPDRDDVTEVVITGEVARGEAEPELITHT 420 Query 416 PEAQQA 421 E + A Sbjct 421 AEEKTA 426 >Q6NFU7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=clpX PE=3 SV=1 Length=430 Score = 518 bits (1333), Expect = 0.0, Method: Compositional matrix adjust. Identities = 258/418 (62%), Positives = 321/418 (77%), Gaps = 12/418 (3%) Query 5 RKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSA- 63 R S LL CSFCGKSQ +V+KLIAG VYICDEC++LCN+II EE+ A + + Sbjct 3 RMQESADLLKCSFCGKSQKQVKKLIAGGGVYICDECIELCNEIIEEELNSSAAEAKDNGD 62 Query 64 -LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNG--------VELGKSN 114 LP P +I LD YVIGQ+ AK++L+VAVYNHYKR+R ++ EL KSN Sbjct 63 RLPRPSQISAFLDKYVIGQDDAKRILSVAVYNHYKRVRAEESRTTHKRASEEETELQKSN 122 Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 IL++GPTGSGKT LA+TLARLLDVPF +ADAT+LTEAGYVGEDVENI+ KLLQ D+DVQ Sbjct 123 ILMLGPTGSGKTYLAQTLARLLDVPFAIADATSLTEAGYVGEDVENILLKLLQAADFDVQ 182 Query 175 KAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQE 234 +AQRGI+Y+DE+DKISRKSDNPSITRDVSGEGVQQALLK++EGTVA++PPQGGRKHP Q+ Sbjct 183 RAQRGIIYVDEVDKISRKSDNPSITRDVSGEGVQQALLKILEGTVASIPPQGGRKHPNQD 242 Query 235 FLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPED 294 F+Q+DTS ILFI GAFAGL+KVI R GIGFGA + K+D + ++ V PED Sbjct 243 FIQLDTSNILFIVAGAFAGLEKVIEER-RGKKGIGFGAELTTKADTDAV-DVFRDVLPED 300 Query 295 LIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEA 354 L+KFGLIPEFIGRLP+VAT+N L + +L+++L EP+N+L KQYQ LF+++ VDLEF EA Sbjct 301 LVKFGLIPEFIGRLPIVATVNNLDQASLVKVLTEPRNSLVKQYQRLFDMDRVDLEFDPEA 360 Query 355 LDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLI 412 L AIA A+ R TGARGLR+I+E L+ MYD+P EDV V I+E+ + G +P +I Sbjct 361 LQAIADLAIDRGTGARGLRAIMEELLVPVMYDIPDREDVAVVRINEAAVRGLQEPEMI 418 >A0LSV2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B) OX=351607 GN=clpX PE=3 SV=1 Length=427 Score = 517 bits (1332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 259/408 (63%), Positives = 315/408 (77%), Gaps = 9/408 (2%) Query 10 GKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRER-SALPTPH 68 G LL CSFCGKSQ +V+KLIAGP VYICDEC+DLCN+ E + H + LP P Sbjct 8 GDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNE--IIEEELSESHEPKFDQLPKPR 65 Query 69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTS----NGVELGKSNILLIGPTGSG 124 EI LD YVIGQE AKK L+VAVYNHYKR++ G +S + VEL KSNILLIGPTG G Sbjct 66 EICEFLDQYVIGQETAKKALSVAVYNHYKRIQVGGSSRSSNDSVELAKSNILLIGPTGCG 125 Query 125 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYID 184 KT LA+TLAR+L+VPF +ADAT LTEAGYVGEDVENI+ KL+Q DYDV++A+ GI+YID Sbjct 126 KTYLAQTLARMLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVKRAETGIIYID 185 Query 185 EIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKIL 244 EIDKI+RKS+NPSITRDVSGEGVQQALLK++EGT A+VPPQGGRKHP QEF+Q+DT+ IL Sbjct 186 EIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQIDTTNIL 245 Query 245 FICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEF 304 FI GGAFAGL+K+I R+ GIGF AT+ K D + ++ + V PEDL+K+G+IPEF Sbjct 246 FIVGGAFAGLEKIIEARIGK-KGIGFTATLHGKRD-LNTADIFSHVMPEDLLKYGMIPEF 303 Query 305 IGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMA 364 +GRLPV+ T+ L EALI+IL EPKNAL +QYQ LF L+ VDLEF D+AL+AIA +A+ Sbjct 304 VGRLPVITTVTSLDREALIRILTEPKNALVRQYQRLFELDSVDLEFTDDALEAIADQAIL 363 Query 365 RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLI 412 R TGARGLR+I+E LL MYD+PS DV +VVI V+ P L+ Sbjct 364 RGTGARGLRAIMEEVLLSVMYDIPSRTDVARVVITRDVVLNNVNPTLV 411 >A0JXL2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Arthrobacter sp. (strain FB24) OX=290399 GN=clpX PE=3 SV=1 Length=429 Score = 516 bits (1330), Expect = 0.0, Method: Compositional matrix adjust. Identities = 263/416 (63%), Positives = 318/416 (76%), Gaps = 18/416 (4%) Query 9 SGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPH 68 S LL CSFCGKSQ +VRKLIAGP VYICDEC++LCN+II EE+ EVA LP P Sbjct 7 STDLLKCSFCGKSQKQVRKLIAGPGVYICDECIELCNEIIEEELAEVA-DLGSFELPKPR 65 Query 69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDT-----------SNGVELGKSNILL 117 EI + L +YVIGQE AK+ LAVAVYNHYKR++ G + VE+ KSNILL Sbjct 66 EIYDFLQEYVIGQEPAKRSLAVAVYNHYKRIQAGHAPKSGSLAEGVHHDDVEIAKSNILL 125 Query 118 IGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQ 177 IGPTG GKT LA+TLAR L+VPF +ADAT LTEAGYVGEDVENI+ KL+Q DYDV+KA+ Sbjct 126 IGPTGCGKTYLAQTLARRLNVPFAVADATALTEAGYVGEDVENILLKLIQAADYDVKKAE 185 Query 178 RGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQ 237 +GI+YIDEIDKISRKS+NPSITRDVSGEGVQQALLK++EGTVA+VPPQGGRKHP QEF+Q Sbjct 186 QGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQ 245 Query 238 VDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATV-KAKSDKASEGELLAQVEPEDLI 296 +DT+ +LFI GAFAGL+ +I R GIGFGA + + K++ S GE++ PEDL+ Sbjct 246 IDTTNVLFIVAGAFAGLEDIIGSR-SGRKGIGFGAPLNEVKNNSDSYGEVM----PEDLL 300 Query 297 KFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALD 356 KFGLIPEFIGRLPV+ T++ L ALIQIL PKNAL KQYQ +F L+GV+L F DEALD Sbjct 301 KFGLIPEFIGRLPVITTVSNLDRPALIQILSTPKNALVKQYQKMFQLDGVELLFDDEALD 360 Query 357 AIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLI 412 IA +A+ R TGARGLR+I+E LL M+DLPS +D+ VVI V+ ++ P +I Sbjct 361 VIADQALERGTGARGLRAIMEEVLLPVMFDLPSRDDIASVVITADVVAKKAPPTMI 416 >Q6AFZ6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=clpX PE=3 SV=1 Length=424 Score = 509 bits (1312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 256/424 (60%), Positives = 323/424 (76%), Gaps = 15/424 (4%) Query 9 SGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSA---LP 65 S LL CSFCGKSQ +V++LIAGP VYICDECV+LCN+II E + E E S+ LP Sbjct 7 SADLLKCSFCGKSQKQVQQLIAGPGVYICDECVELCNEIIEERLAEAG--EEASSEFDLP 64 Query 66 TPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN------GDTSNGVELGKSNILLIG 119 P EI L++YVIGQEQAK+ LAVAVYNHYKR+R D + VE+ KSNILLIG Sbjct 65 KPKEIFGFLEEYVIGQEQAKRSLAVAVYNHYKRVRARQAITAADAIDDVEIAKSNILLIG 124 Query 120 PTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRG 179 PTG GKT LA+TLAR L+VPF +ADAT LTEAGYVGEDVENI+ KL+Q DYDV++A+ G Sbjct 125 PTGCGKTYLAQTLARRLNVPFAVADATALTEAGYVGEDVENILLKLIQAADYDVKRAETG 184 Query 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVD 239 I+YIDE+DKI+RK++NPSITRDVSGEGVQQALLK++EGTVA+VPPQGGRKHP QEF+Q+D Sbjct 185 IIYIDEVDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQID 244 Query 240 TSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFG 299 T+ +LFI GAFAGL+ +IS+R GIGFGA + +K D + L ++V PEDL KFG Sbjct 245 TTNVLFIVAGAFAGLEDIISNRA-GKKGIGFGAPLHSKGDDIN---LFSEVLPEDLHKFG 300 Query 300 LIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIA 359 LIPEFIGRLPVV T+ +L ++AL+QIL EPKNAL +QYQ +F L+GV LEF AL+AIA Sbjct 301 LIPEFIGRLPVVTTVTQLDQDALMQILTEPKNALVRQYQRMFELDGVQLEFDHAALEAIA 360 Query 360 KKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQ 419 A+ RKTGARGLR+I+E L M+++PS +V +VV+ + + + P ++ +P + Sbjct 361 DLAVLRKTGARGLRAIMEEVLGPIMFEVPSSSEVARVVVTKEAVLENAAPTIVPHRPRRE 420 Query 420 QASG 423 + S Sbjct 421 EKSA 424 >B0RAS4 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) OX=31964 GN=clpX PE=3 SV=1 Length=426 Score = 491 bits (1265), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 246/412 (60%), Positives = 312/412 (76%), Gaps = 12/412 (3%) Query 9 SGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE-RSALPTP 67 S LL CSFCGKSQ +V++LIAGP VYICDECV+LCN+II E + E + LP P Sbjct 7 SADLLKCSFCGKSQKQVQQLIAGPGVYICDECVELCNEIIEERLAEASEETTGEFDLPKP 66 Query 68 HEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDT-------SNGVELGKSNILLIGP 120 EI LD+YVIGQE AK+ L+VAVYNHYKR+R T + +E+ KSNILLIGP Sbjct 67 KEIFGFLDEYVIGQEAAKRALSVAVYNHYKRVRAVSTIGPAKTVGDEIEIAKSNILLIGP 126 Query 121 TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI 180 TG GKT LA+TLA+ L+VPF +ADAT LTEAGYVGEDVENI+ KL+Q DYDV++A+ GI Sbjct 127 TGCGKTYLAQTLAKRLNVPFAVADATALTEAGYVGEDVENILLKLIQAADYDVKRAETGI 186 Query 181 VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT 240 +YIDE+DKI+RK++NPSITRDVSGEGVQQALLK++EGTVA+VPPQGGRKHP QEF+QVDT Sbjct 187 IYIDEVDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQVDT 246 Query 241 SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGL 300 + +LFI GAFAGL+ +IS R GIGFGA + K A ++ +V PEDL KFGL Sbjct 247 TNVLFIVAGAFAGLEDIISQRAGK-KGIGFGAPLHRKDLNA---DVFGEVLPEDLHKFGL 302 Query 301 IPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAK 360 IPEFIGRLPVV T+ +L + AL++IL +P+NAL +QYQ +F L+GV+LEF AL++IA Sbjct 303 IPEFIGRLPVVTTVTQLDQRALMEILTKPRNALVRQYQRMFELDGVELEFEQGALESIAD 362 Query 361 KAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLI 412 A+ R+TGARGLR+I+E L M+D+PS ++V +VVI + + P ++ Sbjct 363 LAVLRQTGARGLRAILEEVLGPIMFDIPSDDEVGRVVITRESVVQNAAPTIV 414 >Q8G5R1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=clpX PE=3 SV=2 Length=472 Score = 432 bits (1112), Expect = 6e-150, Method: Compositional matrix adjust. Identities = 233/439 (53%), Positives = 304/439 (69%), Gaps = 48/439 (11%) Query 15 CSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHL 74 C+FCGK++H+VRKL+AGP+ ICDEC+ LC DII EE + A S LP P +I ++L Sbjct 14 CTFCGKTEHQVRKLVAGPNASICDECIALCVDIISEERVKDAEVNSLS-LPKPAQIFDYL 72 Query 75 DDYVIGQEQAKKVLAVAVYNHYKRL----------------------------------- 99 + YVIGQE AK+ L+VAVYNHYKR+ Sbjct 73 NRYVIGQENAKRALSVAVYNHYKRVNMELQESAEQLDGNNGHSGQTSKQAKQSVPTQTRA 132 Query 100 --RNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGED 157 R+ D VE+ KSNILL+GPTG GKT LA+ LAR+++VPF + DATTLTEAGYVG+D Sbjct 133 TRRSNDPLADVEVAKSNILLLGPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDD 192 Query 158 VENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKS-DNPSITRDVSGEGVQQALLKLIE 216 VE ++Q+LLQ D DV +AQ GI+YIDEIDKI+RKS +N SITRDVSGEGVQQALLK++E Sbjct 193 VETVLQRLLQAADGDVSRAQHGIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILE 252 Query 217 GTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRV---ETGSGIGFGAT 273 GT+A+VP +G RKH +Q+ Q+DT ILFICGGAF GL ++ R+ ETG FGA Sbjct 253 GTIASVPLEGTRKHKEQDVAQMDTRGILFICGGAFVGLTDIVRKRLGRRETG----FGAN 308 Query 274 VKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333 +D E ELL QV +DL +FGL+PEFIGRLPV + L EL+ + L IL +P NAL Sbjct 309 WH-DADMKDE-ELLEQVNADDLAEFGLLPEFIGRLPVTSVLKELTVDDLTAILTQPANAL 366 Query 334 TKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDV 393 KQY+ LF ++GVDL+F ++A+ AIA A+ + TGARGLRSI+E L DTM+ LPS++DV Sbjct 367 IKQYRKLFAVDGVDLQFTEQAIRAIADIAIKQGTGARGLRSIIERTLQDTMFQLPSLDDV 426 Query 394 EKVVIDESVIDGQSKPLLI 412 +V++D++ ++G S P L+ Sbjct 427 RQVIVDKASVEGSSTPKLL 445 >A0K1M3 ATPase AAA-2 domain protein OS=Arthrobacter sp. (strain FB24) OX=290399 GN=Arth_3818 PE=3 SV=1 Length=857 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/328 (26%), Positives = 144/328 (44%), Gaps = 65/328 (20%) Query 74 LDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLA 133 L V+GQE A ++A +V +R R G + G +G + L +GPTG GKT LA+ LA Sbjct 547 LHQRVVGQEDAVSLIAKSV----RRNRTGMGAAGRPIG--SFLFLGPTGVGKTELAKALA 600 Query 134 RLL------DVPFTMAD------ATTLTEA--GYVGEDVENIIQKLLQKCDYDVQKAQRG 179 L + F M++ + L A GYVG D + + +++ Y Sbjct 601 GSLFGSEDSMIRFDMSEFGERHTVSRLVGAPPGYVGYDEAGQLTERVRRNPYS------- 653 Query 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVD 239 IV +DE++K D ++ V +G +L +G GR + + + Sbjct 654 IVLLDEVEKA--HPDVFNLLLQVLDDG------RLTDGH--------GRTVDFRNTVVIM 697 Query 240 TSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFG 299 TS + G F L T +G FG S+KA +LA+ ++ Sbjct 698 TSNL----GSEF--LASKAGPTGFTAAGDAFG------SEKALRDRVLAR------LRES 739 Query 300 LIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIA 359 + PEF+ R+ + +L L QI++ + + A +G+ L ++A+D IA Sbjct 740 MRPEFLNRIDEIVLFRKLDRAQLRQIVR----LMLDETDARLRSQGIGLVVSEDAVDWIA 795 Query 360 KKAMARKTGARGLRSIVEAALLDTMYDL 387 ++ + GAR +R +++ L D + DL Sbjct 796 ERGYEPEYGARPMRRVIQRELDDRIADL 823 >Q8G871 Protease OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=clpC PE=3 SV=1 Length=869 Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 144/344 (42%), Gaps = 71/344 (21%) Query 74 LDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLA 133 L +IGQ++A L+ ++ L++ +G + + GPTG GKT LA+TLA Sbjct 518 LHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSG------SFIFAGPTGVGKTELAKTLA 571 Query 134 RLL---DVPFTMADATTLTEA-----------GYVG-EDVENIIQKLLQKCDYDVQKAQR 178 L + D + +E GYVG E+ + +K V++ Sbjct 572 EFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEK--------VRRKPF 623 Query 179 GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQV 238 +V DEI+K +P I LL++++ + GRK V Sbjct 624 SVVLFDEIEKA-----HPDIF---------NTLLQVLDD--GHLTDGQGRK--------V 659 Query 239 DTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKF 298 D + I D I+ TG +G ++++S + QV E +K Sbjct 660 DFKNTIIILTTNLGTRD--IAKAANTGFNLG-------ANNESSYQRMKDQVSSE--LKQ 708 Query 299 GLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAI 358 PEF+ RL + +L+E + QI+ L + LF+ + LE D A D + Sbjct 709 QFRPEFLNRLDDIIVFKQLTEPQVRQIVDLDVKQLNDR---LFDRH-MSLELTDAAKDLL 764 Query 359 AKKAMARKTGARGLRSIVEAALLDTMYD---LPSMEDVEKVVID 399 A+K GAR LR +++ + D + + + +ED ++V++D Sbjct 765 AQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDGQRVIVD 808 >Q8FMH5 Putative endopeptidase Clp ATP-binding chain C OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 PE=4 SV=1 Length=927 Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 79/357 (22%), Positives = 145/357 (41%), Gaps = 69/357 (19%) Query 70 IRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLA 129 + L +IGQ++A K ++ A+ L++ +G + + GP+G GKT L+ Sbjct 528 MEEELHKRIIGQDEAVKAVSRAIRRTRAGLKDPKRPSG------SFIFAGPSGVGKTELS 581 Query 130 ETLARLL---DVPFTMAD---------ATTLTEA--GYVG-EDVENIIQKLLQKCDYDVQ 174 + LA L D D A+ L A GYVG E+ + +K V+ Sbjct 582 KALAEFLFGDDDSLIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEK--------VR 633 Query 175 KAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQE 234 + +V DEI+K ++ + LL+++E G Q Sbjct 634 RKPFSVVLFDEIEKAHKE--------------IYNTLLQVLE--------DGRLTDGQGR 671 Query 235 FLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPED 294 + + ++F + K + G+GF + + SD A + +V E Sbjct 672 IVDFKNTVLIFTSNLGTQDISKAV--------GLGFSGSNETDSD-AQYDRMKNKVHDE- 721 Query 295 LIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEA 354 +K PEF+ R+ + ++L+ E +IQ+++ L + + + +E D+A Sbjct 722 -LKKHFRPEFLNRIDEIVVFHQLTREQIIQMVE----LLIGRVSRALADKDMGIELTDKA 776 Query 355 LDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDV---EKVVIDESVIDGQSK 408 +A + GAR LR ++ + D M + ++ E V +D DG+SK Sbjct 777 KALLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVDGWDGESK 833 >Q6NFB1 ATP-dependent Clp protease ATP-binding subunit OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=clpC PE=4 SV=1 Length=883 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 74/356 (21%), Positives = 148/356 (42%), Gaps = 67/356 (19%) Query 70 IRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLA 129 + L +IGQ+ A K ++ A+ L++ +G + + GP+G GKT L+ Sbjct 528 MEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDPRRPSG------SFIFAGPSGVGKTELS 581 Query 130 ETLARLL---DVPFTMAD---------ATTLTEA--GYVGEDVENIIQKLLQKCDYDVQK 175 ++LA L D D A+ L A GYVG D + + +++ + V Sbjct 582 KSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSV-- 639 Query 176 AQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEF 235 V DEI+K ++ + LL+++E +G Q Sbjct 640 -----VLFDEIEKAHKE--------------IYNTLLQVLE--------EGRLTDGQGRV 672 Query 236 LQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDL 295 + + ++F + K + G+GF + + D + + + Q + D Sbjct 673 VDFKNTVLIFTSNLGTQDISKAV--------GMGFSSV--GEHDADGQYDRMKQ-KVNDE 721 Query 296 IKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEAL 355 +K PEF+ R+ + ++L++E +++++ + L + + + +E ++A Sbjct 722 LKKHFRPEFLNRIDEIVVFHQLTQEQIVEMV----DLLIGRVSKALAQKDMGIELTEKAK 777 Query 356 DAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDV---EKVVIDESVIDGQSK 408 + +AK+ GAR LR ++ + D + + +V E V +D DG+SK Sbjct 778 NLLAKRGFDPVLGARPLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESK 833 >A0LW31 AAA ATPase, central domain protein OS=Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B) OX=351607 GN=Acel_1869 PE=4 SV=1 Length=691 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 13/127 (10%) Query 67 PHEIRNHLDDYV----IGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTG 122 P +I LDD V I E + V + + R G G IL GP G Sbjct 100 PEQIDVRLDDVVGIDVIKAEVVRSVNLFLAHRTFSRDMGGRPRRG-------ILFEGPPG 152 Query 123 SGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVY 182 +GKT LA+ +A+ +VPF A AT+ ++G G + ++ + +K I + Sbjct 153 TGKTYLAKAIAKEANVPFLFATATSF-QSGLQGA-TQRKVRAFFRALRATARKEGGAIGF 210 Query 183 IDEIDKI 189 IDE D + Sbjct 211 IDEFDAL 217 >A0LRB8 ATP-dependent zinc metalloprotease FtsH OS=Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B) OX=351607 GN=ftsH PE=3 SV=1 Length=654 Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 39/77 (51%), Gaps = 6/77 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L Q+ + Sbjct 187 VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEM-FVGVGASR-VRDLFQQAKENAP 244 Query 175 KAQRGIVYIDEIDKISR 191 IV+IDEID + R Sbjct 245 ----AIVFIDEIDAVGR 257 >Q8G6B7 Holliday junction ATP-dependent DNA helicase RuvB OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=ruvB PE=3 SV=1 Length=354 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 60/126 (48%), Gaps = 24/126 (19%) Query 69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLL 128 E+R H+ IGQ + K L + + KR ++ +ILL GP G GKT L Sbjct 36 ELRPHVLGGFIGQPRLKAQLQLFLDAARKR----------DVPPDHILLAGPPGLGKTTL 85 Query 129 AETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDK 188 A +A L+VP + + AG D+ +I+ L DV + +++IDEI + Sbjct 86 AMIVANELEVPIRVTSGPAVQHAG----DLASILSSL------DVGE----VLFIDEIHR 131 Query 189 ISRKSD 194 + R ++ Sbjct 132 LPRAAE 137 >A0LR74 ATP-dependent zinc metalloprotease FtsH OS=Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B) OX=351607 GN=ftsH PE=3 SV=1 Length=666 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/79 (32%), Positives = 43/79 (54%), Gaps = 6/79 (8%) Query 114 NILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDV 173 +L++GP G+GKTL+A +A VPF ++ E +VG ++ L ++ Sbjct 214 GVLMVGPPGTGKTLMARAVAGEAGVPFLSVTGSSFVEM-FVGVGASR-VRDLFEEA---- 267 Query 174 QKAQRGIVYIDEIDKISRK 192 +K IV++DEID I ++ Sbjct 268 RKHAPCIVFVDEIDAIGQR 286 >Q6ACQ0 ATP-dependent zinc metalloprotease FtsH OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=ftsH PE=3 SV=1 Length=667 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (52%), Gaps = 6/77 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L Q+ + Sbjct 200 VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEM-FVGVGASR-VRDLFQQA----K 253 Query 175 KAQRGIVYIDEIDKISR 191 + I++IDEID + R Sbjct 254 ENSPAIIFIDEIDAVGR 270 >Q8G3S2 ATP-dependent zinc metalloprotease FtsH OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=ftsH PE=3 SV=1 Length=696 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 40/78 (51%), Gaps = 6/78 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L + + Sbjct 252 VLLYGPPGTGKTLLARAIAGEAGVPFYSMAGSDFVEM-FVGLGASR-VRDLFDEA----K 305 Query 175 KAQRGIVYIDEIDKISRK 192 K I++IDEID + RK Sbjct 306 KNAPAIIFIDEIDAVGRK 323 >A0JXB1 Holliday junction ATP-dependent DNA helicase RuvB OS=Arthrobacter sp. (strain FB24) OX=290399 GN=ruvB PE=3 SV=1 Length=362 Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 60/123 (49%), Gaps = 25/123 (20%) Query 72 NHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAET 131 +L D+V GQ + +K L++ + R R+ D ++LL GP G GKT L+ Sbjct 25 KNLHDFV-GQHRVRKQLSLVLEASRMRGRSAD----------HVLLSGPPGLGKTTLSMI 73 Query 132 LARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISR 191 +A ++ P ++ + AG D+ I+ L ++ ++++DEI ++SR Sbjct 74 IAAEMNAPLRISSGPAIQHAG----DLAAILSSL----------SEGEVLFLDEIHRMSR 119 Query 192 KSD 194 ++ Sbjct 120 PAE 122 >A0JR82 ATP-dependent zinc metalloprotease FtsH OS=Arthrobacter sp. (strain FB24) OX=290399 GN=ftsH PE=3 SV=1 Length=689 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 40/77 (52%), Gaps = 6/77 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L ++ + Sbjct 205 VLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEM-FVGVGASR-VRDLFEQA----K 258 Query 175 KAQRGIVYIDEIDKISR 191 + I+++DEID + R Sbjct 259 ASSPAIIFVDEIDAVGR 275 >A0K236 AAA ATPase, central domain protein OS=Arthrobacter sp. (strain FB24) OX=290399 GN=Arth_3981 PE=3 SV=1 Length=471 Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/105 (29%), Positives = 52/105 (50%), Gaps = 18/105 (17%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTE--AGYVGEDVENIIQKLLQKCDYD 172 ++L GP G+GKT A+ +A L+ PF + L G G L++ + Sbjct 231 VVLFGPPGTGKTTFAKAIASRLEWPFVEVFPSRLAADPKGLAGA---------LRETFLE 281 Query 173 VQKAQRGIVYIDEIDKIS--RKSDNPSITRDVSGEGVQQALLKLI 215 + + + +V+IDE+++I+ R + PS +GV LLK+I Sbjct 282 IAELEHAVVFIDEVEEIASQRSGEPPSPL-----QGVTNELLKII 321 >B0RHW4 ATP-dependent zinc metalloprotease FtsH OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) OX=31964 GN=ftsH PE=3 SV=1 Length=666 Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 40/77 (52%), Gaps = 6/77 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L ++ + Sbjct 200 VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEM-FVGVGASR-VRDLFEQA----K 253 Query 175 KAQRGIVYIDEIDKISR 191 + I+++DEID + R Sbjct 254 QNAPAIIFVDEIDAVGR 270 >Q6NF92 ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=ftsH PE=3 SV=1 Length=824 Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (49%), Gaps = 6/78 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG + Q + Sbjct 206 VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEM-FVGVGASRVRDLFKQ-----AR 259 Query 175 KAQRGIVYIDEIDKISRK 192 + I++IDEID + R+ Sbjct 260 ENSPCIIFIDEIDAVGRQ 277 >Q6NGK1 AAA domain-containing protein OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=DIP1512 PE=3 SV=1 Length=516 Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/70 (36%), Positives = 37/70 (53%), Gaps = 19/70 (27%) Query 67 PHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKT 126 PH++ + D V+GQ AKK +AV G NI++IGP GSGK+ Sbjct 196 PHKVGDMQD--VVGQSDAKKAAEIAVA-----------------GGHNIVMIGPPGSGKS 236 Query 127 LLAETLARLL 136 ++A+ +A LL Sbjct 237 MIAQRMAGLL 246 >Q8FMG2 ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=ftsH PE=3 SV=1 Length=812 Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 40/77 (52%), Gaps = 6/77 (8%) Query 115 ILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQ 174 +LL GP G+GKTLLA +A VPF + E +VG ++ L ++ + Sbjct 203 VLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEM-FVGVGASR-VRDLFKQA----K 256 Query 175 KAQRGIVYIDEIDKISR 191 + I++IDEID + R Sbjct 257 ENSPCIIFIDEIDAVGR 273 Lambda K H a alpha 0.316 0.135 0.378 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1402758714 Database: proteins.fasta Posted date: May 15, 2022 1:48 PM Number of letters in database: 6,094,370 Number of sequences in database: 18,604 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40